blosloos. To fix this you can add URL: https://rickhelmus.r-universe.dev/enviPick to the package DESCRIPTION file. See also theR-universe documentation.Package: enviPick 1.94

Martin Loos
enviPick: Peak Picking for High Resolution Mass Spectrometry Data
Sequential partitioning, clustering and peak detection of centroided LC-MS mass spectrometry data (.mzXML). Interactive result and raw data plot.
Authors:
enviPick_1.94.tar.gz
enviPick_1.94.zip(r-4.7)enviPick_1.94.zip(r-4.6)enviPick_1.94.zip(r-4.5)
enviPick_1.94.tgz(r-4.6-x86_64)enviPick_1.94.tgz(r-4.6-arm64)enviPick_1.94.tgz(r-4.5-x86_64)enviPick_1.94.tgz(r-4.5-arm64)
enviPick_1.94.tar.gz(r-4.7-arm64)enviPick_1.94.tar.gz(r-4.7-x86_64)enviPick_1.94.tar.gz(r-4.6-arm64)enviPick_1.94.tar.gz(r-4.6-x86_64)
enviPick_1.94.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
enviPick/json (API)
NEWS
| # Install 'enviPick' in R: |
| install.packages('enviPick', repos = c('https://rickhelmus.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/blosloos/envipick/issues
Last updated from:5550c74ff0. Checks:11 WARNING, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | WARNING | 130 | ||
| linux-devel-x86_64 | WARNING | 129 | ||
| source / vignettes | OK | 170 | ||
| linux-release-arm64 | WARNING | 150 | ||
| linux-release-x86_64 | WARNING | 133 | ||
| macos-release-arm64 | WARNING | 100 | ||
| macos-release-x86_64 | WARNING | 148 | ||
| macos-oldrel-arm64 | WARNING | 107 | ||
| macos-oldrel-x86_64 | WARNING | 219 | ||
| windows-devel | WARNING | 104 | ||
| windows-release | WARNING | 100 | ||
| windows-oldrel | WARNING | 116 | ||
| wasm-release | OK | 105 |
Exports:enviPickbatchenviPickwrapmzagglommzclustmzpartmzpickplotMSlistreadMSdatawebpickwritePeaklist
Dependencies:base64encbslibcachemclicommonmarkdigestfastmapfontawesomefsgluehtmltoolshttpuvjquerylibjsonlitelaterlifecyclemagrittrmemoisemimeotelpromisesR6rappdirsRcppreadMzXmlDatarlangsassshinysourcetoolswithrXMLxtable
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Peak picking for high resolution liquid chromatography - mass spectrometry (LC-HRMS) data | enviPick-package enviPick |
| Batch peak picking for several .mzXML input files | enviPickbatch |
| Peak detection for LC-HRMS .mzML and .mzXML data | enviPickwrap |
| Agglomerative partitioning of raw LC-HRMS measurements | mzagglom |
| EIC-clustering of LC-HRMS data. | mzclust |
| Divisive partitioning of raw LC-HRMS measurements | mzpart |
| EIC peak picking | mzpick |
| Interactive raw data and result viewer | plotMSlist |
| Read LC-HRMS measurement .mzXML data | readMSdata |
| enviPick web browser UI | webpick |
| Export a .csv peak table from an MSlist object | writePeaklist |